Réponses adaptatives des microorganismes à leur environnement

Adaptive responses of microorganisms to their environment

2024

Melanie Rossotti, Diletta Arceri, Pascal Mansuelle, Olivier Bornet, Anne Durand, Soufian Ouchane, Hélène Launay, Pierre Dorlet.
The green cupredoxin CopI is a multicopper protein able to oxidize Cu(I).
Journal of Inorganic Biochemistry, 2024, 254, 112503. DOI: 10.1016/j.jinorgbio.2024.112503 HAL: hal-04448188v1

Margot Di Cesare, Elise Kaplan, Julia Rendon, Guillaume Gerbaud, Sepideh Valimehr, Alexia Gobet, Thu-Anh Thi Ngo, Vincent Chaptal, Pierre Falson, Marlène Martinho, Pierre Dorlet, Eric Hanssen, Jean-Michel Jault, Cédric Orelle.
The transport activity of the multidrug ABC transporter BmrA does not require a wide separation of the nucleotide-binding domains.
Journal of Biological Chemistry, 2024, 300 (1), 105546. DOI: 10.1016/j.jbc.2023.105546 HAL: hal-04435310

2023

Daniele Di Bari, Stepan Timr, Marianne Guiral, Marie-Thérèse Giudici-Orticoni, Tilo Seydel, Christian Beck, Caterina Petrillo, Philippe Derreumaux, Simone Melchionna, Fabio Sterpone, Judith Peters, Alessandro Paciaroni.
Diffusive Dynamics of Bacterial Proteome as a Proxy of Cell Death.
ACS Cent. Sci., 2023. DOI: 10.1021/acscentsci.2c01078 HAL: hal-03936222v1

2022

Emma M. Fortier, Sophie Bouillet, Pascale Infossi, Amine Ali Chaouche, Leon Espinosa, Marie-Thérèse Giudici-Orticoni, Emilia M. F. Mauriello, Chantal Iobbi-Nivol.
Defining Two Chemosensory Arrays in Shewanella oneidensis.
Biomolecules, 2022, 13 (1), 21. DOI: 10.3390/biom13010021 HAL: hal-03932516v1

Taiki Adachi, Ievgen Mazurenko, Nicolas Mano, Yuki Kitazumi, Kunishige Kataoka, Kenji Kano, Keisei Sowa, Elisabeth Lojou.
Kinetic and thermodynamic analysis of Cu2+-dependent reductive inactivation in direct electron transfer-type bioelectrocatalysis by copper efflux oxidase.
Electrochimica Acta, 2022, 429, 140987. DOI: 10.1016/j.electacta.2022.140987 HAL: hal-03752803v1

Marie Corteggiani, Nadège Bossuet-Greif, Jean-Philippe Nougayrède, Deborah Byrne, Marianne Ilbert, Sébastien Dementin, Marie-Thérèse Giudici-Orticoni, Vincent Méjean, Eric Oswald, Olivier Genest.
Uncoupling the Hsp90 and DnaK chaperone activities revealed the in vivo relevance of their collaboration in bacteria.
Proc. Natl. Acad. Sci. U.S.A., 2022, 119 (37). DOI: 10.1073/pnas.2201779119 HAL: hal-03844063v1

Cassy Gérard, Frédéric Carrière, Véronique Receveur-Bréchot, Hélène Launay, Brigitte Gontero.
A Trajectory of Discovery: Metabolic Regulation by the Conditionally Disordered Chloroplast Protein, CP12.
Biomolecules, 2022, 12 (8), 1047 –. DOI: 10.3390/biom12081047 HAL: hal-03747280

Anne Boyeldieu, Jean‐Pierre Poli, Amine Ali Chaouche, Henri‐Pierre Fierobe, Marie‐Thérèse Giudici‐Orticoni, Vincent Méjean, Cécile Jourlin‐Castelli.
Multiple detection of both attractants and repellents by the dCache ‐chemoreceptor SO_1056 of Shewanella oneidensis.
The FEBS Journal, 2022. DOI: 10.1111/febs.16548 HAL: hal-03740302v1

Amine Ali Chaouche, Laetitia Houot, Denis Duché, Chantal Iobbi-Nivol, Marie-Thérèse Giudici-Orticoni, Michel Fons, Vincent Méjean.
The Tol-Pal system of Escherichia coli plays an unexpected role in the import of the oxyanions chromate and phosphate.
Research in Microbiology, 2022, 103967 –. DOI: 10.1016/j.resmic.2022.103967 HAL: hal-03783277v1

Lisa Zuily, Nora Lahrach, Rosi Fassler, Olivier Genest, Peter Faller, Olivier Sénèque, Yann Denis, Marie-Pierre Castanié-Cornet, Pierre Genevaux, Ursula Jakob, Dana Reichmann, Marie-Thérèse Giudici-Orticoni, Marianne Ilbert.
Copper Induces Protein Aggregation, a Toxic Process Compensated by Molecular Chaperones.
mBio, 2022, 13 (2). DOI: 10.1128/mbio.03251-21 HAL: hal-03666635v1

I. Mazurenko, T. Adachi, B. Ezraty, M. Ilbert, K. Sowa, E. Lojou.
Electrochemistry of copper efflux oxidase-like multicopper oxidases involved in copper homeostasis.
Current Opinion in Electrochemistry, 2022, 32, 100919 –. DOI: 10.1016/j.coelec.2021.100919 HAL: hal-03489391v1

2021

Rosi Fassler, Lisa Zuily, Nora Lahrach, Marianne Ilbert, Dana Reichmann.
The Central Role of Redox-Regulated Switch Proteins in Bacteria.
Front. Mol. Biosci., 2021, 8. DOI: 10.3389/fmolb.2021.706039 HAL: hal-03432179v1

Anne Boyeldieu, Amine Ali Chaouche, Vincent Méjean, Cécile Jourlin-Castelli.
Combining two optimized and affordable methods to assign chemoreceptors to a specific signal.
Analytical Biochemistry, 2021, 620, 114139 –. DOI: 10.1016/j.ab.2021.114139 HAL: hal-03195889v1

Patricija van Oosten-Hawle, Steven Bergink, Brian Blagg, Jeff Brodsky, Adrienne Edkins, Brian Freeman, Olivier Genest, Linda Hendershot, Harm Kampinga, Jill Johnson, Antonio De Maio, Dan Masison, Kevin Morano, Gabriele Multhoff, Chris Prodromou, Veena Prahlad, Ruth Scherz-Shouval, Anastasia Zhuravleva, Mehdi Mollapour, Andrew W. Truman.
First Virtual International Congress on Cellular and Organismal Stress Responses, November 5–6, 2020.
Cell Stress and Chaperones, 2021, 26 (2), 289 – 295. DOI: 10.1007/s12192-021-01192-7 HAL: hal-03367646v1

Nathanael Jean Maillot, Pascale Infossi, Sébastien Dementin, Marie-Thérèse Giudici-Orticoni, Vincent Méjean, Olivier Genest.
Modulation of the RNA polymerase activity by AtcB, a protein associated with a DnaK chaperone network in Shewanella oneidensis.
Biochemical and Biophysical Research Communications, 2021, 535, 66 – 72. DOI: 10.1016/j.bbrc.2020.12.015 HAL: hal-03116745v1

Romain Clément, Xie Wang, Frédéric Biaso, Marianne Ilbert, Ievgen Mazurenko, Elisabeth Lojou.
Mutations in the coordination spheres of T1 Cu affect Cu2+-activation of the laccase from Thermus thermophilus.
Biochimie, 2021, 182, 228-237. DOI: 10.1016/j.biochi.2021.01.006 HAL: hal-03127150v1

Luisana Avilan, Regine Lebrun, Carine Puppo, Sylvie Citerne, Stephane Cuiné, Yonghua Li-Beisson, Benoit Menand, Ben Field, Brigitte Gontero.
ppGpp influences protein protection, growth and photosynthesis in Phaeodactylum tricornutum.
New Phytol, 2021. DOI: 10.1111/nph.17286 HAL: hal-02903690-V2

2020

Erik L. Jensen, Stephen C. Maberly, Brigitte Gontero.
Insights on the Functions and Ecophysiological Relevance of the Diverse Carbonic Anhydrases in Microalgae.
IJMS, 2020, 21 (8), 2922 –. DOI: 10.3390/ijms21082922 HAL: hal-02555638v1

Olivier N Lemaire, Vincent Méjean, Chantal Iobbi-Nivol.
The Shewanella genus: ubiquitous organisms sustaining and preserving aquatic ecosystems.
FEMS Microbiology Reviews, 2020. DOI: 10.1093/femsre/fuz031 HAL: hal-02936277

Vivek Pratap Hitaishi, Romain Clément, Ludovica Quattrocchi, Philippe Parent, David Duché, Lisa Zuily, Marianne Ilbert, Elisabeth Lojou, Ievgen Mazurenko.
Interplay between Orientation at Electrodes and Copper Activation of Thermus thermophilus Laccase for O2 Reduction.
J. Am. Chem. Soc., 2020, 142 (3), 1394 – 1405. DOI: 10.1021/jacs.9b11147 HAL: hal-02503732v1

2019

Nathanael Jean Maillot, Flora Ambre Honoré, Deborah Byrne, Vincent Méjean, Olivier Genest.
Cold adaptation in the environmental bacterium Shewanella oneidensis is controlled by a J-domain co-chaperone protein network.
Commun Biol, 2019, 2 (1). DOI: 10.1038/s42003-019-0567-3 HAL: hal-02371718v1

Olivier N. Lemaire, Flora A. Honoré, Sébastien Tempel, Emma M. Fortier, Silke Leimkühler, Vincent Méjean, Chantal Iobbi-Nivol.
Shewanella decolorationis LDS1 Chromate Resistance.
Appl Environ Microbiol, 2019, 66 (18), 4947 –. DOI: 10.1128/AEM.00777-19 HAL: hal-02273170v1

Flora Ambre Honoré, Nathanael Jean Maillot, Vincent Méjean, Olivier Genest.
Interplay between the Hsp90 Chaperone and the HslVU Protease To Regulate the Level of an Essential Protein in Shewanella oneidensis.
mBio, 2019, 78 (3), 219 –. DOI: 10.1128/mBio.00269-19 HAL: hal-02180326v1

Sophie Bouillet, Moly Ba, Laetitia Houot, Chantal Iobbi-Nivol, Christophe Bordi.
Connected partner-switches control the life style of Pseudomonas aeruginosa through RpoS regulation.
Sci Rep, 2019, 9 (1). DOI: 10.1038/s41598-019-42653-5 HAL: hal-02179894v1

Laura J. Blair, Olivier Genest, Mehdi Mollapour.
The multiple facets of the Hsp90 machine.
Nat Struct Mol Biol, 2019, 24 (2), 2013 – 95. DOI: 10.1038/s41594-018-0177-7 HAL: hal-02273116v1

Cyril Gambari, Anne Boyeldieu, Joshua Armitano, Vincent Méjean, Cécile Jourlin-Castelli.
Control of pellicle biogenesis involves the diguanylate cyclases PdgA and PdgB, the c-di-GMP binding protein MxdA and the chemotaxis response regulator CheY3 in Shewanella oneidensis.
Environ Microbiol, 2019, 21 (1), 81 – 97. DOI: 10.1111/1462-2920.14424 HAL: hal-01890343v1

Olivier Genest, Sue Wickner, Shannon M. Doyle.
Hsp90 and Hsp70 chaperones: Collaborators in protein remodeling.
J. Biol. Chem., 2019, 745 (6), 1 – 2120. DOI: 10.1074/jbc.REV118.002806 HAL: hal-02273131v1

2018

Nadine Schwanhold, Chantal Iobbi-Nivol, Angelika Lehmann, Silke Leimkühler.
Same but different: Comparison of two system-specific molecular chaperones for the maturation of formate dehydrogenases.
PLoS ONE, 2018, 4 (4), 406 –. DOI: 10.1371/journal.pone.0201935 HAL: hal-01927954v1

Olivier N. Lemaire, Pascale Infossi, Amine Ali Chaouche, Leon Espinosa, Silke Leimkühler, Marie-Thérèse Giudici-Orticoni, Vincent Méjean, Chantal Iobbi-Nivol.
Small membranous proteins of the TorE/NapE family, crutches for cognate respiratory systems in Proteobacteria.
Sci Rep, 2018, 251 (Suppl 1), 744 –. DOI: 10.1038/s41598-018-31851-2 HAL: hal-01890252v1

Hiba Baaziz, Olivier N. Lemaire, Cécile Jourlin-Castelli, Chantal Iobbi-Nivol, Vincent Méjean, Radia Alatou, Michel Fons.
Draft Genome Sequence of Shewanella algidipiscicola H1, a Highly Chromate-Resistant Strain Isolated from Mediterranean Marine Sediments.
Microbiol Resour Announc, 2018, 12 (8), 1788 –. DOI: 10.1128/MRA.00905-18 HAL: hal-01890325v1

E Mileo, M Ilbert, A Barducci, P Bordes, M-P Castanié-Cornet, C Garnier, P Genevaux, R Gillet, P Goloubinoff, F Ochsenbein, G Richarme, C Iobbi-Nivol, M-T Giudici, B Gontero , O Genest.
Emerging fields in chaperone proteins: A French workshop.
Biochimie, 2018, 151, 159 – 165. DOI: 10.1016/j.biochi.2018.06.004 HAL: hal-01863220v1

Axel Aigle, Patricia Bonin, Nicolas Fernandez-Nunez, Béatrice Loriod, Sophie Guasco, Aurélie Bergon, Fabrice Armougom, Chantal Iobbi-Nivol, Jean Imbert, Valérie Michotey.
The nature of the electron acceptor (MnIV/NO3) triggers the differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3.
2018, 32 (13), 171 –. DOI: 10.1093/femsle/fny068 HAL: hal-01766209v1

Andrea N. Kravats, Joel R. Hoskins, Michael Reidy, Jill L. Johnson, Shannon M. Doyle, Olivier Genest, Daniel C. Masison, Sue Wickner.
Functional and physical interaction between yeast Hsp90 and Hsp70.
Proc Natl Acad Sci USA, 2018, 67 (10), 947 – E2219. DOI: 10.1073/pnas.1719969115 HAL: hal-01890402v1

Sophie Bouillet, Dallel Arabet, Cécile Jourlin-Castelli, Vincent Méjean, Chantal Iobbi-Nivol.
Regulation of σ factors by conserved partner switches controlled by divergent signalling systems.
Environmental Microbiology Reports, 2018, 70 (2), 1136 – 139. DOI: 10.1111/1758-2229.12620 HAL: hal-01890037v1

Stephen Christopher Maberly, Brigitte Gontero.
Trade-offs and Synergies in the Structural and Functional Characteristics of Leaves Photosynthesizing in Aquatic Environments.
The Leaf: A Platform for Performing Photosynthesis. Advances in Photosynthesis and Respiration (Including Bioenergy and Related Processes), 2018, vol 44 (6025), 1 – 343. DOI: 10.1007/978-3-319-93594-2_11 HAL: hal-02045962v1

2017

Hiba Baaziz, Cyril Gambari, Anne Boyeldieu, Amine Ali Chaouche, Radia Alatou, Vincent Méjean, Cécile Jourlin-Castelli, Michel Fons.
ChrASO, the chromate efflux pump of Shewanella oneidensis, improves chromate survival and reduction.
PLoS ONE, 2017, 8 (11), e77987 –. DOI: 10.1371/journal.pone.0188516 HAL: hal-01696687v1

Sophie Bouillet, Olivier Genest, Vincent Méjean, Chantal Iobbi-Nivol.
Protection of the general stress response σ S factor by the CrsR regulator allows a rapid and efficient adaptation of Shewanella oneidensis.
J. Biol. Chem., 2017, 36 (36), 410 – 14928. DOI: 10.1074/jbc.M117.781443 HAL: hal-01696646v1

Flora Ambre Honoré, Vincent Méjean, Olivier Genest.
Hsp90 Is Essential under Heat Stress in the Bacterium Shewanella oneidensis.
Cell Reports, 2017, 19 (4), 680 – 687. DOI: 10.1016/j.celrep.2017.03.082 HAL: hal-01525196v1

Axel Aigle, Patricia Bonin, Chantal Iobbi-Nivol, Vincent Méjean, Valérie Michotey.
Physiological and transcriptional approaches reveal connection between nitrogen and manganese cycles in Shewanella algae C6G3.
Sci Rep, 2017, 48 (1), 5 –. DOI: 10.1038/srep44725 HAL: hal-01493279v1

Andrea N. Kravats, Shannon M. Doyle, Joel R. Hoskins, Olivier Genest, Erin Doody, Sue Wickner.
Interaction of E. coli Hsp90 with DnaK Involves the DnaJ Binding Region of DnaK.
Journal of Molecular Biology, 2017, 429 (6), 858 – 872. DOI: 10.1016/j.jmb.2016.12.014 HAL: hal-01697476v1

Olivier N. Lemaire, Sophie Bouillet, Vincent Méjean, Chantal Iobbi-Nivol, Olivier Genest.
Chaperones in maturation of molybdoenzymes: Why specific is better than general?.
Bioengineered, 2017, 8 (2), 133 – 136. DOI: 10.1080/21655979.2016.1218579 HAL: hal-01413222v1

2016

Sophie Bouillet, Olivier Genest, Cécile Jourlin-Castelli, Michel Fons, Vincent Méjean, Chantal Iobbi-Nivol.
The General Stress Response σ S Is Regulated by a Partner Switch in the Gram-negative Bacterium Shewanella oneidensis.
J. Biol. Chem., 2016, 49 (50), 603 – 26163. DOI: 10.1074/jbc.M116.751933 HAL: hal-01415795v1

Olivier N. Lemaire, Flora A. Honoré, Cécile Jourlin-Castelli, Vincent Méjean, Michel Fons, Chantal Iobbi-Nivol.
Efficient respiration on TMAO requires TorD and TorE auxiliary proteins in Shewanella oneidensis.
Research in Microbiology, 2016, 167 (8), 630 – 637. DOI: 10.1016/j.resmic.2016.05.004 HAL: hal-01411703v1

Vincent Méjean.
Two-component regulatory systems: The moment of truth.
Research in Microbiology, 2016, 167 (1), 1 – 3. DOI: 10.1016/j.resmic.2015.09.004 HAL: hal-01411558v1

2015

Olivier Genest, Joel R. Hoskins, Andrea N. Kravats, Shannon M. Doyle, Sue Wickner.
Hsp70 and Hsp90 of E. coli Directly Interact for Collaboration in Protein Remodeling.
Journal of Molecular Biology, 2015, 427 (24), 3877 – 3889. DOI: 10.1016/j.jmb.2015.10.010 HAL: hal-01432234v1

Saida Benomar, David Ranava, María Luz Cárdenas, Eric Trably, Yan Rafrafi, Adrien Ducret, Jérôme Hamelin, Elisabeth Lojou, Jean-Philippe Steyer, Marie-Thérèse Giudici-Orticoni.
Nutritional stress induces exchange of cell material and energetic coupling between bacterial species.
Nat Commun, 2015, 73 (1), 5389 –. DOI: 10.1038/ncomms7283 HAL: hal-01159245v1