Métabolisme du carbone, décarbonation et leurs enzymes

Carbon metabolism, decarbonation and their enzymes

2024

Ana Rita Oliveira, Cristiano Mota, Guilherme Vilela-Alves, Rita Rebelo Manuel, Neide Pedrosa, Vincent Fourmond, Kateryna Klymanska, Christophe Léger, Bruno Guigliarelli, Maria João Romão, Inês A. Cardoso Pereira.
An allosteric redox switch involved in oxygen protection in a CO2 reductase.
Nat Chem Biol, 2024, 20 (1), 111-119. DOI: 10.1038/s41589-023-01484-2 HAL: hal-04383526 (dataset available here)

2023

Hélène Launay, Luisana Avilan, Cassy Gérard, Goetz Parsiegla, Véronique Receveur‐Brechot, Brigitte Gontero, Frédéric Carriere.
Location of the photosynthetic carbon metabolism in microcompartments and separated phases in microalgal cells.
FEBS Letters, 2023, – . DOI: 10.1002/1873-3468.14754 HAL: hal-04290010v1

B. Gontero, S. Maberly.
Introduction à la productivité et au cycle du carbone dans les écosystèmes aquatiques.
Planète bleue, photosynthèse rouge et verte, 2023 (ISBN 9781789480825), pp 5-28. HAL: hal-04048883

B. Gontero, S. Maberly.
Productivité et cycle du carbone dans les écosystèmes marins.
Planète bleue, photosynthèse rouge et verte, 2023 (ISBN 9781789480825). HAL: hal-04048854

Marta Meneghello, Alexandre Uzel, Marianne Broc, Rita R Manuel, Axel Magalon, Inês A. C. Pereira, Christophe Léger, Anne Walburger, Vincent Fourmond.
Electrochemical Kinetics Support a Second Coordination Sphere Mechanism in Metal‐Based Formate Dehydrogenase.
Angew Chem Int Ed, 2023. DOI: 10.1002/anie.202212224 HAL: hal-03965660

B. Gontero, S. Maberly.
Mécanismes biochimiques de concentration du dioxyde de carbone.
Planète bleue, photosynthèse rouge et verte, 2023 (ISBN 9781789480825), 135-168. HAL: hal-04048896

2022

Stephen Christopher Maberly, Andrew W. Stott, Brigitte Gontero.
The differential ability of two species of seagrass to use carbon dioxide and bicarbonate and their modelled response to rising concentrations of inorganic carbon.
Front. Plant Sci., 2022, 13. DOI: 10.3389/fpls.2022.936716 HAL: hal-03791304v1

Victoire Blanc-Garin, Théo Veaudor, Pierre Sétif, Brigitte Gontero, Stéphane D. Lemaire, Franck Chauvat, Corinne Cassier-Chauvat.
First in vivo analysis of the regulatory protein CP12 of the model cyanobacterium Synechocystis PCC 6803: Biotechnological implications.
Front. Plant Sci., 2022, 13. DOI: 10.3389/fpls.2022.999672 HAL: hal-03775884v1

Cassy Gérard, Frédéric Carrière, Véronique Receveur-Bréchot, Hélène Launay, Brigitte Gontero.
A Trajectory of Discovery: Metabolic Regulation by the Conditionally Disordered Chloroplast Protein, CP12.
Biomolecules, 2022, 12 (8), 1047 –. DOI: 10.3390/biom12081047 HAL: hal-03747280

Sven T. Stripp, Benjamin R. Duffus, Vincent Fourmond, Christophe Léger, Silke Leimkühler, Shun Hirota, Yilin Hu, Andrew Jasniewski, Hideaki Ogata, Markus W. Ribbe.
Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.
Chem. Rev., 2022, 122 (14), 11900 – 11973. DOI: 10.1021/acs.chemrev.1c00914 HAL: hal-03741456

Edition: Brigitte Gontero, Stephen Maberly.
Blue Planet, Red and Green Photosynthesis: Productivity and Carbon Cycling in Aquatic Ecosystems.
Blue Planet, Red and Green Photosynthesis: Productivity and Carbon Cycling in Aquatic Ecosystems, 2022. DOI: 10.1002/9781119986782 HAL: hal-03693757v1

Brigitte Gontero, Timothy M. Lenton, Stephen Christopher Maberly.
An Introduction to Productivity and Carbon Cycling in Aquatic Ecosystems.
Blue Planet, Red and Green Photosynthesis: Productivity and Carbon Cycling in Aquatic Ecosystems, 2022, 1 – 25. DOI: 10.1002/9781119986782.ch1 HAL: hal-03693800v1

Brigitte Gontero, Stephen Christopher Maberly.
Biochemical Carbon Dioxide Concentrating Mechanisms.
Blue Planet, Red and Green Photosynthesis: Productivity and Carbon Cycling in Aquatic Ecosystems, 2022, 133 – 166. DOI: 10.1002/9781119986782.ch5 HAL: hal-03693774v1

Alison Biester, Sébastien Dementin, Catherine L. Drennan.
Visualizing the gas channel of a monofunctional carbon monoxide dehydrogenase.
Journal of Inorganic Biochemistry, 2022, 230, 111774 –. DOI: 10.1016/j.jinorgbio.2022.111774 HAL: hal-03616609v1

Cassy Gérard, Régine Lebrun, Erwan Lemesle, Luisana Avilan, Kwang Suk Chang, EonSeon Jin, Frédéric Carrière, Brigitte Gontero, Hélène Launay.
Reduction in Phosphoribulokinase Amount and Re-Routing Metabolism in Chlamydomonas reinhardtii CP12 Mutants.
IJMS, 2022, 23 (5), 2710 –. DOI: 10.3390/ijms23052710 HAL: hal-03594470

Asmaa Hadj Ahmed, Jean-Vincent Daurelle, Vincent Fourmond.
Optimizing the mass transport of wall-tube electrodes for protein film electrochemistry.
Electrochimica Acta, 2022, 403, 139521. DOI: 10.1016/j.electacta.2021.139521 HAL: hal-03485431

2021

Rodrigo Arias-Cartin, Alexandre Uzel, Farida Seduk, Guillaume Gerbaud, Fabien Pierrel, Marianne Broc, Régine Lebrun, Bruno Guigliarelli, Axel Magalon, Stéphane Grimaldi, Anne Walburger.
Identification and characterization of a non-canonical menaquinone-linked formate dehydrogenase.
Journal of Biological Chemistry, 2021, 101384. DOI: 10.1016/j.jbc.2021.101384 HAL: hal-03431446v1

Marta Meneghello, Christophe Léger, Vincent Fourmond.
Electrochemical studies of CO2‐reducing metalloenzymes.
Chem. Eur. J., 2021. DOI: 10.1002/chem.202102702 HAL: hal-03358088

Hélène Launay, Véronique Receveur-Bréchot, Frédéric Carrière, Brigitte Gontero.
Protein disorder in algal metabolism.
Atlas of Science, 2021. (voir / see) HAL: hal-03326941

Erik L. Jensen, Véronique Receveur-Brechot, Mohand Hachemane, Laura Wils, Pascale Barbier, Goetz Parsiegla, Brigitte Gontero, Hélène Launay.
Structural Contour Map of the Iota Carbonic Anhydrase from the Diatom Thalassiosira pseudonana Using a Multiprong Approach.
IJMS, 2021, 22 (16), 8723 –. DOI: 10.3390/ijms22168723 HAL: hal-03321117v1

Stephen C. Maberly, Brigitte Gontero, Carine Puppo, Adrien Villain, Ilenia Severi, Mario Giordano.
Inorganic carbon uptake in a freshwater diatom, Asterionella formosa (Bacillariophyceae): from ecology to genomics.
Phycologia, 2021, 1 – 12. DOI: 10.1080/00318884.2021.1916297 HAL: hal-03251911v1

Helene Launay, Hui Shao, Olivier Bornet, Francois-Xavier Cantrelle, Regine Lebrun, Veronique Receveur-Brechot, Brigitte Gontero.
Flexibility of Oxidized and Reduced States of the Chloroplast Regulatory Protein CP12 in Isolation and in Cell Extracts.
Biomolecules, 2021, 11 (5), 701 –. DOI: 10.3390/biom11050701 HAL: hal-03194824

Vincent Fourmond, Nicolas Plumeré, Christophe Léger.
Reversible catalysis.
Nat Rev Chem, 2021, 5 (5). DOI: 10.1038/s41570-021-00268-3 HAL: hal-03215154

Umberto Contaldo, Bruno Guigliarelli, Julien Perard, Clara Rinaldi, Alan Le Goff, Christine Cavazza.
Efficient Electrochemical CO2/CO Interconversion by an Engineered Carbon Monoxide Dehydrogenase on a Gas-Diffusion Carbon Nanotube-Based Bioelectrode.
ACS Catal., 2021, 11 (9), 5808 – 5817. DOI: 10.1021/acscatal.0c05437 HAL: hal-03258521v1

Hui Shao, Wenmin Huang, Luisana Avilan, Véronique Receveur-Bréchot, Carine Puppo, Rémy Puppo, Régine Lebrun, Brigitte Gontero, Hélène Launay.
A new type of flexible CP12 protein in the marine diatom Thalassiosira pseudonana.
Cell Commun Signal, 2021, 19 (1). DOI: 10.1186/s12964-021-00718-x HAL: hal-03194815

Marta Meneghello, Ana Rita Oliveira, Aurore Jacq-Bailly, Inês Cardoso Peirera, Christophe Léger, Vincent Fourmond.
Formate dehydrogenases reduce CO2 rather than HCO3‐: an electrochemical demonstration.
Angew. Chem. Int. Ed., 2021. DOI: 10.1002/anie.202101167 HAL: hal-03181024

Luisana Avilan, Regine Lebrun, Carine Puppo, Sylvie Citerne, Stephane Cuiné, Yonghua Li-Beisson, Benoit Menand, Ben Field, Brigitte Gontero.
ppGpp influences protein protection, growth and photosynthesis in Phaeodactylum tricornutum.
New Phytol, 2021. DOI: 10.1111/nph.17286 HAL: hal-02903690-V2

2020

Wenmin Huang, Shijuan Han, Hongsheng Jiang, Shuping Gu, Wei Li, Brigitte Gontero, Stephen C Maberly.
External α-carbonic anhydrase and solute carrier 4 are required for bicarbonate uptake in a freshwater angiosperm.
J. Exp. Bot, 2020, 71 (19), 6004 – 6014. DOI: 10.1093/jxb/eraa351 HAL: hal-02969019v1

Hélène Launay, Wenmin Huang, Stephen C. Maberly, Brigitte Gontero.
Regulation of Carbon Metabolism by Environmental Conditions: A Perspective From Diatoms and Other Chromalveolates.
Front. Plant Sci., 2020, 11. DOI: 10.3389/fpls.2020.01033 HAL: hal-02903680v1

Elizabeth Charlotte Wittenborn, Chloé Guendon, Mériem Merrouch, Martino Benvenuti, Vincent Fourmond, Christophe Leger, Catherine L. Drennan, and Sébastien Dementin.
The solvent-exposed Fe-S D-cluster contributes to oxygen-resistance in D. vulgaris Ni-Fe carbon monoxide dehydrogenase.
ACS Cat., 2020, 10, 7328–7335. DOI: 10.1021/acscatal.0c00934 HAL: hal-02936282

Erik L. Jensen, Stephen C. Maberly, Brigitte Gontero.
Insights on the Functions and Ecophysiological Relevance of the Diverse Carbonic Anhydrases in Microalgae.
IJMS, 2020, 21 (8), 2922 –. DOI: 10.3390/ijms21082922 HAL: hal-02555638v1

Martino Benvenuti, Marta Meneghello, Chloé Guendon, Aurore Jacq-Bailly, Jae-hun Jeoung, Holger Dobbek, Christophe Léger, Vincent Fourmond, Sébastien Dementin.
The two CO-dehydrogenases of Thermococcus sp. AM4.
Biochimica et Biophysica Acta (BBA) – Bioenergetics, 2020, 148188 –. DOI: 10.1016/j.bbabio.2020.148188 HAL: hal-02537797

Ana Rita Oliveira, Cristiano Mota, Cláudia Mourato, Renato M. Domingos, Marino F. A. Santos, Diana Gesto, Bruno Guigliarelli, Teresa Santos-Silva, Maria João Romão, Inês A. Cardoso Pereira.
Toward the Mechanistic Understanding of Enzymatic CO2 Reduction.
ACS Catal., 2020, 10 (6), 3844 – 3856. DOI: 10.1021/acscatal.0c00086 HAL: hal-02938569

Shijuan Han, Stephen C Maberly, Brigitte Gontero, Zhenfei Xing, Wei Li, Hongsheng Jiang, Wenmin Huang.
Structural basis for C4 photosynthesis without Kranz anatomy in leaves of the submerged freshwater plant Ottelia alismoides.
Annals of Botany, 2020, 125 (6), 869 – 879. DOI: 10.1093/aob/mcaa005 HAL: hal-02572396v1

2019

Hélène Launay, Véronique Receveur-Bréchot, Frédéric Carrière, Brigitte Gontero.
Orchestration of algal metabolism by protein disorder.
Archives of Biochemistry and Biophysics, 2019, 672, 108070 –. DOI: 10.1016/j.abb.2019.108070 HAL: hal-02266032v1

Elizabeth C. Wittenborn, Steven E. Cohen, Mériem Merrouch, Christophe Léger, Vincent Fourmond, Sébastien Dementin, Catherine L. Drennan.
Structural insight into metallocofactor maturation in carbon monoxide dehydrogenase.
J. Biol. Chem., 2019, 257 (35), 6259 – 13026. DOI: 10.1074/jbc.RA119.009610 HAL: hal-02188452v1

Erik L. Jensen, Romain Clement, Artemis Kosta, Stephen C. Maberly, Brigitte Gontero.
A new widespread subclass of carbonic anhydrase in marine phytoplankton.
ISME J, 2019, 14 (W1), 300 – 2106. DOI: 10.1038/s41396-019-0426-8 HAL: hal-02176562v1

2018

Elizabeth C Wittenborn, Mériem Merrouch, Chie Ueda, Laura Fradale, Christophe Léger, Vincent Fourmond, Maria-Eirini Pandelia, Sébastien Dementin, Catherine L Drennan.
Redox-dependent rearrangements of the NiFeS cluster of carbon monoxide dehydrogenase.
2018, 119, 13690 –. DOI: 10.7554/eLife.39451 HAL: hal-01917213v1

Wen Min Huang, Hui Shao, Si Ning Zhou, Qin Zhou, Wen Long Fu, Ting Zhang, Hong Sheng Jiang, Wei Li, Brigitte Gontero, Stephen C. Maberly.
Different CO2 acclimation strategies in juvenile and mature leaves of Ottelia alismoides.
Photosynth Res, 2018, 121 (2), 285 – 232. DOI: 10.1007/s11120-018-0568-y HAL: hal-01875659v1

Hélène Launay, Patrick Barré, Carine Puppo, Yizhi Zhang, Stéphanie Maneville, Brigitte Gontero, Véronique Receveur-Bréchot.
Cryptic Disorder Out of Disorder: Encounter between Conditionally Disordered CP12 and Glyceraldehyde-3-Phosphate Dehydrogenase.
Journal of Molecular Biology, 2018, 430 (8), 1218 – 1234. DOI: 10.1016/j.jmb.2018.02.020 HAL: hal-01794097v1

Melisa del Barrio, Matteo Sensi, Christophe Orain, Carole Baffert, Sébastien Dementin, Vincent Fourmond, Christophe Léger.
Electrochemical Investigations of Hydrogenases and Other Enzymes That Produce and Use Solar Fuels.
Acc. Chem. Res., 2018, 51 (3), 769 – 777. DOI: 10.1021/acs.accounts.7b00622 HAL: hal-01745738v1

Mériem Merrouch, Martino Benvenuti, Marco Lorenzi, Christophe Léger, Vincent Fourmond, Sébastien Dementin.
Maturation of the [Ni–4Fe–4S] active site of carbon monoxide dehydrogenases.
J Biol Inorg Chem, 2018, 37 (4), 80 – 620. DOI: 10.1007/s00775-018-1541-0 HAL: hal-01816335v1

Stephen Christopher Maberly, Brigitte Gontero.
Trade-offs and Synergies in the Structural and Functional Characteristics of Leaves Photosynthesizing in Aquatic Environments.
The Leaf: A Platform for Performing Photosynthesis. Advances in Photosynthesis and Respiration (Including Bioenergy and Related Processes), 2018, vol 44 (6025), 1 – 343. DOI: 10.1007/978-3-319-93594-2_11 HAL: hal-02045962v1

2017

Lilith Domnik, Meriem Merrouch, Sebastian Goetzl, Jae-Hun Jeoung, Christophe Léger, Sébastien Dementin, Vincent Fourmond, Holger Dobbek.
CODH-IV: A High-Efficiency CO-Scavenging CO Dehydrogenase with Resistance to O2.
Angew. Chem. Int. Ed., 2017, 121 (48), 11034 – 15469. DOI: 10.1002/anie.201709261 HAL: hal-01696167v1

Stephen C Maberly, Brigitte Gontero.
Ecological imperatives for aquatic CO2-concentrating mechanisms.
2017, 121 (14), 285 – 3814. DOI: 10.1093/jxb/erx201 HAL: hal-01556739v1

Christophe Léger.
Oxydation et production de dihydrogène : leçons de la nature.
Colloque “Biomimétisme et chimie durable”, Direction de la recherche et de l’innovation Service de la recherche, 2017. (voir / see)

Romain Clement, Erik Jensen, Laura Prioretti, Stephen C Maberly, Brigitte Gontero.
Diversity of CO2-concentrating mechanisms and responses to CO2 concentration in marine and freshwater diatoms.
2017, 121 (14), 285 – 3935. DOI: 10.1093/jxb/erx035 HAL: hal-01514716v1

Hui Shao, Brigitte Gontero, Stephen C Maberly, Hong Sheng Jiang, Yu Cao, Wei Li, Wen Min Huang.
Responses of Ottelia alismoides, an aquatic plant with three CCMs, to variable CO2 and light.
2017, 121 (14), 285 – 3995. DOI: 10.1093/jxb/erx064 HAL: hal-01535902v1

Romain Clement, Sabrina Lignon, Pascal Mansuelle, Erik Jensen, Matthieu Pophillat, Regine Lebrun, Yann Denis, Carine Puppo, Stephen C. Maberly, Brigitte Gontero.
Responses of the marine diatom Thalassiosira pseudonana to changes in CO2 concentration: a proteomic approach.
Sci Rep, 2017, 275 (1), 1248 –. DOI: 10.1038/srep42333 HAL: hal-01445073v1

2016

Romain Clement, Laura Dimnet, Stephen C. Maberly, Brigitte Gontero.
The nature of the CO2-concentrating mechanisms in a marine diatom, Thalassiosira pseudonana.
New Phytol, 2016, 121 (4), 285 – 1427. DOI: 10.1111/nph.13728 HAL: hal-01406058v1

Hélène Launay, Patrick Barré, Carine Puppo, Stéphanie Manneville, Brigitte Gontero, Véronique Receveur-Bréchot.
Absence of residual structure in the intrinsically disordered regulatory protein CP12 in its reduced state.
Biochemical and Biophysical Research Communications, 2016, 477 (1), 20 – 26. DOI: 10.1016/j.bbrc.2016.06.014 HAL: hal-01430932v1

2015

Jessica Hadj-Saïd, Maria-Eirini Pandelia, Christophe Léger, Vincent Fourmond, Sébastien Dementin.
The Carbon Monoxide Dehydrogenase from Desulfovibrio vulgaris.
Biochimica et Biophysica Acta (BBA) – Bioenergetics, 2015, 1847 (12), 1574 – 1583. DOI: 10.1016/j.bbabio.2015.08.002 HAL: hal-01430965v1

Meriem Merrouch, Jessica Hadj-Saïd, Lilith Domnik, Holger Dobbek, Christophe Léger, Sébastien Dementin, Vincent Fourmond.
O2 Inhibition of Ni-Containing CO Dehydrogenase Is Partly Reversible.
Chem. Eur. J., 2015, 181 (52), 437 – 18938. DOI: 10.1002/chem.201502835 HAL: hal-01432205v1

Vincent Fourmond, Carole Baffert, Sébastien Dementin, Christophe Léger.
L’électrochimie, un outil pour étudier les mécanismes enzymatiques.
L’Actualité Chimique, 2015 (392).

2014

Yizhi Zhang, Liyan Yin, Hong-Sheng Jiang, Wei Li, Brigitte Gontero, Stephen C. Maberly.
Biochemical and biophysical CO2 concentrating mechanisms in two species of freshwater macrophyte within the genus Ottelia (Hydrocharitaceae).
Photosynth Res, 2014, 7 (2-3), e37438 – 297. DOI: 10.1007/s11120-013-9950-y HAL: hal-01494530v1